Example SingleCellExperiment containing gene-level RNA-seq data.

sce

Format

An object of class SingleCellExperiment with 500 rows and 100 columns.

See also

Examples

suppressPackageStartupMessages(library(SingleCellExperiment)) data(sce) class(sce)
#> [1] "SingleCellExperiment" #> attr(,"package") #> [1] "SingleCellExperiment"
sce
#> class: SingleCellExperiment #> dim: 230 80 #> metadata(1): date #> assays(2): counts logcounts #> rownames(230): ENSG00000156738 ENSG00000007312 ... ENSG00000159674 #> ENSG00000160307 #> rowData names(6): broadClass entrezID ... geneName seqCoordSystem #> colnames(80): ATGCCAGAACGACT CATGGCCTGTGCAT ... GGAACACTTCAGAC #> CTTGATTGATCTTC #> colData names(1): sampleID #> reducedDimNames(1): UMAP #> spikeNames(0):